USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: Q9UM05 USC-OGP 2-DE database:  Q9UM05 Q9UM05 General information about the entry View entry in simple text format Entry name SC31A_HUMAN Primary accession number Q9UM05 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Protein transport protein Sec31A; AltName: Full=ABP125; AltName: Full=ABP130; AltName: Full=SEC31-like protein 1; AltName: Full=SEC31-related protein A; AltName: Full=Web1-like protein;. Gene name Name=SEC31A Synonyms=KIAA0905, SEC31L1 ORFNames=HSPC275, HSPC334 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1094: pI=6.11; Mw=155482 Cross-references UniProtKB/Swiss-Prot O94979; SC31A_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name SC31A_HUMAN Primary accession number O94979 Secondary accession number(s) B4DIW6 B7ZKZ7 B7ZL00 H7C2W3 Q17RR5 Q5H9P6 Q5XG74 Q659G7 Q6ZU90 Q7LCX9 Q86TJ0 Q8IZH4 Q9P048 Q9P0A6 Q9UM05 Q9UM06 Sequence was last modified on  July 10, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 144) Name and origin of the protein Description RecName: Full=Protein transport protein Sec31A; AltName: Full=ABP125; AltName: Full=ABP130; AltName: Full=SEC31-like protein 1; AltName: Full=SEC31-related protein A; AltName: Full=Web1-like protein; Gene name Name=SEC31A Synonyms=KIAA0905, SEC31L1 ORFNames=HSPC275, HSPC334 Encoded on Name=SEC31A; Synonyms=KIAA0905, SEC31L1; ORFNames=HSPC275, HSPC334 Keywords 3D-structure; Alternative splicing; Chromosomal rearrangement; Complete proteome; Cytoplasm; Cytoplasmic vesicle; Endoplasmic reticulum; ER-Golgi transport; Isopeptide bond; Membrane; Phosphoprotein; Polymorphism; Protein transport; Proto-oncogene; Reference proteome; Repeat; Transport; Ubl conjugation; WD repeat. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF139184; AAF67836.1; -; mRNA EMBL AB018358; BAA84923.1; -; mRNA EMBL AB018359; BAA84924.1; -; mRNA EMBL AB020712; BAA74928.2; -; mRNA EMBL AK125897; BAC86336.1; -; mRNA EMBL AK295810; BAG58628.1; -; mRNA EMBL AL049463; CAH56418.1; -; mRNA EMBL CR933696; CAI45995.1; ALT_SEQ; mRNA EMBL AC021105; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL AC108469; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CH471057; EAX05908.1; -; Genomic_DNA EMBL BC047883; AAH47883.1; -; mRNA EMBL BC084583; AAH84583.1; -; mRNA EMBL BC117221; AAI17222.1; -; mRNA EMBL BC143489; AAI43490.1; -; mRNA EMBL BC143491; AAI43492.1; -; mRNA EMBL BC143492; AAI43493.1; -; mRNA EMBL AY137583; AAN15221.1; -; mRNA EMBL AF161393; AAF28953.1; ALT_FRAME; mRNA EMBL AF161452; AAF29012.1; ALT_FRAME; mRNA CCDS CCDS3596.1; -. [O94979-1]; . CCDS CCDS3597.1; -. [O94979-4]; . CCDS CCDS43244.1; -. [O94979-3]; . CCDS CCDS47088.1; -. [O94979-2]; . CCDS CCDS54773.1; -. [O94979-9]; . CCDS CCDS75155.1; -. [O94979-6]; . CCDS CCDS75156.1; -. [O94979-10]; . RefSeq NP_001070674.1; NM_001077206.3. [O94979-3]; . RefSeq NP_001070675.1; NM_001077207.3. [O94979-1]; . RefSeq NP_001070676.1; NM_001077208.3. [O94979-2]; . RefSeq NP_001177978.1; NM_001191049.2. [O94979-9]; . RefSeq NP_001287673.1; NM_001300744.2. [O94979-6]; . RefSeq NP_001287674.1; NM_001300745.2. [O94979-10]; . RefSeq NP_001305048.1; NM_001318119.1. [O94979-2]; . RefSeq NP_001305049.1; NM_001318120.1. [O94979-1]; . RefSeq NP_057295.2; NM_016211.4. [O94979-4]; . UniGene Hs.370024; -; . UniGene Hs.617723; -; . UniGene Hs.728916; -; . PDB 3WXA; X-ray; 2.36 A; C/D=837-848 PDBsum 3WXA; -; . ProteinModelPortal O94979; -; . SMR O94979; -; . BioGrid 116539; 51; . DIP DIP-40438N; -; . IntAct O94979; 36; . MINT MINT-3002555; -; . STRING 9606.ENSP00000347329; -; . TCDB 3.A.5.9.1; the general secretory pathway (sec) family; . iPTMnet O94979; -; . PhosphoSitePlus O94979; -; . SwissPalm O94979; -; . BioMuta SEC31A; -; . EPD O94979; -; . MaxQB O94979; -; . PaxDb O94979; -; . PeptideAtlas O94979; -; . PRIDE O94979; -; . Ensembl ENST00000311785; ENSP00000309070; ENSG00000138674. [O94979-3]; . Ensembl ENST00000348405; ENSP00000337602; ENSG00000138674. [O94979-4]; . Ensembl ENST00000355196; ENSP00000347329; ENSG00000138674. [O94979-1]; . Ensembl ENST00000395310; ENSP00000378721; ENSG00000138674. [O94979-1]; . Ensembl ENST00000443462; ENSP00000408027; ENSG00000138674. [O94979-9]; . Ensembl ENST00000448323; ENSP00000400926; ENSG00000138674. [O94979-1]; . Ensembl ENST00000500777; ENSP00000421464; ENSG00000138674. [O94979-6]; . Ensembl ENST00000505984; ENSP00000424451; ENSG00000138674. [O94979-10]; . Ensembl ENST00000508502; ENSP00000424635; ENSG00000138674. [O94979-2]; . Ensembl ENST00000509142; ENSP00000426569; ENSG00000138674. [O94979-3]; . Ensembl ENST00000513858; ENSP00000426886; ENSG00000138674. [O94979-6]; . GeneID 22872; -; . KEGG hsa:22872; -; . UCSC uc003hnf.3; human. [O94979-1]; . CTD 22872; -; . DisGeNET 22872; -; . GeneCards SEC31A; -; . HGNC HGNC:17052; SEC31A; . HPA HPA005457; -; . MIM 610257; gene; . neXtProt NX_O94979; -; . OpenTargets ENSG00000138674; -; . PharmGKB PA162402737; -; . eggNOG KOG0307; Eukaryota; . eggNOG ENOG410XQ1D; LUCA; . GeneTree ENSGT00390000003175; -; . HOGENOM HOG000230582; -; . HOVERGEN HBG055626; -; . InParanoid O94979; -; . KO K14005; -; . PhylomeDB O94979; -; . TreeFam TF313842; -; . Reactome R-HSA-204005; COPII (Coat Protein 2) Mediated Vesicle Transport; . Reactome R-HSA-2132295; MHC class II antigen presentation; . Reactome R-HSA-381038; XBP1(S) activates chaperone genes; . Reactome R-HSA-983170; Antigen Presentation: Folding; assembly and peptide loading of class I MHC; . SignaLink O94979; -; . ChiTaRS SEC31A; human; . GeneWiki SEC31A; -; . GenomeRNAi 22872; -; . PRO PR:O94979; -; . Proteomes UP000005640; Chromosome 4; . Bgee ENSG00000138674; -; . ExpressionAtlas O94979; baseline and differential; . Genevisible O94979; HS; . GO GO:0030127; C:COPII vesicle coat; NAS:UniProtKB; . GO GO:0005737; C:cytoplasm; IDA:UniProtKB; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0005783; C:endoplasmic reticulum; IDA:UniProtKB; . GO GO:0070971; C:endoplasmic reticulum exit site; IMP:UniProtKB; . GO GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome; . GO GO:0030134; C:ER to Golgi transport vesicle; IDA:UniProtKB; . GO GO:0012507; C:ER to Golgi transport vesicle membrane; TAS:Reactome; . GO GO:0000139; C:Golgi membrane; IEA:GOC; . GO GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA; . GO GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB; . GO GO:0030120; C:vesicle coat; IDA:MGI; . GO GO:0048306; F:calcium-dependent protein binding; IPI:UniProtKB; . GO GO:0019886; P:antigen processing and presentation of exogenous peptide antigen via MHC class II; TAS:Reactome; . GO GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:Reactome; . GO GO:0048208; P:COPII vesicle coating; TAS:Reactome; . GO GO:0006888; P:ER to Golgi vesicle-mediated transport; NAS:UniProtKB; . GO GO:0036498; P:IRE1-mediated unfolded protein response; TAS:Reactome; . GO GO:0015031; P:protein transport; IEA:UniProtKB-KW; . GO GO:0051592; P:response to calcium ion; IDA:UniProtKB; . Gene3D 2.130.10.10; -; 1; . InterPro IPR024298; ACE1_Sec16_Sec31; . InterPro IPR015943; WD40/YVTN_repeat-like_dom; . InterPro IPR001680; WD40_repeat; . InterPro IPR017986; WD40_repeat_dom; . Pfam PF12931; Sec16_C; 1; . SMART SM00320; WD40; 6; . SUPFAM SSF50978; SSF50978; 1; . PROSITE PS50082; WD_REPEATS_2; 1; . PROSITE PS50294; WD_REPEATS_REGION; 1; .

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• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
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